Class ReadBaseStratification.GCContentStratifier

java.lang.Object
picard.sam.SamErrorMetric.ReadBaseStratification.GCContentStratifier
All Implemented Interfaces:
ReadBaseStratification.RecordAndOffsetStratifier<Double>
Enclosing class:
ReadBaseStratification

public static class ReadBaseStratification.GCContentStratifier extends Object
A stratifier that uses GC (of the read) to stratify. Since the reads are expected to be seen over and over again, the GC is cached

Stratification happens into (integer) percents.

  • Constructor Details

    • GCContentStratifier

      public GCContentStratifier()
  • Method Details