Package picard.arrays.illumina
Class Build37ExtendedIlluminaManifestRecordCreator
java.lang.Object
picard.arrays.illumina.Build37ExtendedIlluminaManifestRecordCreator
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Field Summary
Fields -
Method Summary
Modifier and TypeMethodDescriptioncreateRecord
(IlluminaManifestRecord illuminaManifestRecord) boolean
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Field Details
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BUILD_37
- See Also:
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IUPAC_NUCLEOTIDE_CODES
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ACGT_CODES
- See Also:
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FIVE_PRIME_SEQUENCE
public static final int FIVE_PRIME_SEQUENCE- See Also:
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PRE_INDEL_SEQUENCE
public static final int PRE_INDEL_SEQUENCE- See Also:
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INDEL_SEQUENCE
public static final int INDEL_SEQUENCE- See Also:
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THREE_PRIME_SEQUENCE
public static final int THREE_PRIME_SEQUENCE- See Also:
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Method Details
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createRecord
public Build37ExtendedIlluminaManifestRecord createRecord(IlluminaManifestRecord illuminaManifestRecord) -
getUnsupportedBuilds
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isRefStrandDefinedInManifest
public boolean isRefStrandDefinedInManifest()
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