Package picard.sam.SamErrorMetric
Interface ReadBaseStratification.RecordAndOffsetStratifier<T extends Comparable<T>>
- All Known Implementing Classes:
ReadBaseStratification.BinnedReadCycleStratifier
,ReadBaseStratification.CigarOperatorsInReadStratifier
,ReadBaseStratification.CollectionStratifier
,ReadBaseStratification.ConsensusStratifier
,ReadBaseStratification.FlowCellTileStratifier
,ReadBaseStratification.FlowCellXStratifier
,ReadBaseStratification.FlowCellYStratifier
,ReadBaseStratification.GCContentStratifier
,ReadBaseStratification.IndelLengthStratifier
,ReadBaseStratification.IndelsInReadStratifier
,ReadBaseStratification.LongShortHomopolymerStratifier
,ReadBaseStratification.MismatchesInReadStratifier
,ReadBaseStratification.NsInReadStratifier
,ReadBaseStratification.PairStratifier
- Enclosing class:
- ReadBaseStratification
public static interface ReadBaseStratification.RecordAndOffsetStratifier<T extends Comparable<T>>
The main interface for a stratifier.
The Stratifier needs to be able to ake a
RecordAndOffset
and return a value of type T. It also needs to have a suffix for automatically generating metrics file suffixes.-
Method Summary