C API

The GSD C API consists of a single header and source file. Developers can drop the implementation into any package that needs it.

Functions

int gsd_create(const char *fname, const char *application, const char *schema, uint32_t schema_version)

Create an empty gsd file with the given name. Overwrite any existing file at that location. The generated gsd file is not opened. Call gsd_open() to open it for writing.

Parameters:

  • fname – File name (UTF-8 encoded).

  • application – Generating application name (truncated to 63 chars).

  • schema – Schema name for data to be written in this GSD file (truncated to 63 chars).

  • schema_version – Version of the scheme data to be written (make with gsd_make_version()).

Returns:

  • GSD_SUCCESS (0) on success. Negative value on failure:

  • GSD_ERROR_IO: IO error (check errno).

int gsd_create_and_open(struct gsd_handle *handle, const char *fname, const char *application, const char *schema, uint32_t schema_version, gsd_open_flag flags, int exclusive_create)

Create an empty gsd file with the given name. Overwrite any existing file at that location. Open the generated gsd file in handle.

Parameters:

  • handle – Handle to open.

  • fname – File name (UTF-8 encoded).

  • application – Generating application name (truncated to 63 chars).

  • schema – Schema name for data to be written in this GSD file (truncated to 63 chars).

  • schema_version – Version of the scheme data to be written (make with gsd_make_version()).

  • flags – Either GSD_OPEN_READWRITE, or GSD_OPEN_APPEND.

  • exclusive_create – Set to non-zero to force exclusive creation of the file.

Returns:

  • GSD_SUCCESS (0) on success. Negative value on failure:

  • GSD_ERROR_IO: IO error (check errno).

  • GSD_ERROR_NOT_A_GSD_FILE: Not a GSD file.

  • GSD_ERROR_INVALID_GSD_FILE_VERSION: Invalid GSD file version.

  • GSD_ERROR_FILE_CORRUPT: Corrupt file.

  • GSD_ERROR_MEMORY_ALLOCATION_FAILED: Unable to allocate memory.

int gsd_open(struct gsd_handle *handle, const char *fname, gsd_open_flag flags)

Open a GSD file and populates the handle for use by later API calls.

Parameters:

  • handle – Handle to open.

  • fname – File name to open (UTF-8 encoded).

  • flags – Either GSD_OPEN_READWRITE, GSD_OPEN_READONLY, or GSD_OPEN_APPEND.

Returns:

  • GSD_SUCCESS (0) on success. Negative value on failure:

  • GSD_ERROR_IO: IO error (check errno).

  • GSD_ERROR_NOT_A_GSD_FILE: Not a GSD file.

  • GSD_ERROR_INVALID_GSD_FILE_VERSION: Invalid GSD file version.

  • GSD_ERROR_FILE_CORRUPT: Corrupt file.

  • GSD_ERROR_MEMORY_ALLOCATION_FAILED: Unable to allocate memory.

int gsd_truncate(gsd_handle *handle)

Truncate a GSD file.

After truncating, a file will have no frames and no data chunks. The file size will be that of a newly created gsd file. The application, schema, and schema version metadata will be kept. Truncate does not close and reopen the file, so it is suitable for writing restart files on Lustre file systems without any metadata access.

Parameters:

  • handle – Open GSD file to truncate.

Returns:

  • GSD_SUCCESS (0) on success. Negative value on failure:

  • GSD_ERROR_IO: IO error (check errno).

  • GSD_ERROR_NOT_A_GSD_FILE: Not a GSD file.

  • GSD_ERROR_INVALID_GSD_FILE_VERSION: Invalid GSD file version.

  • GSD_ERROR_FILE_CORRUPT: Corrupt file.

  • GSD_ERROR_MEMORY_ALLOCATION_FAILED: Unable to allocate memory.

int gsd_close(gsd_handle *handle)

Close a GSD file.

Parameters:

  • handle – GSD file to close.

Warning

Ensure that all gsd_write_chunk() calls are committed with gsd_end_frame() before closing the file.

Returns:

  • GSD_SUCCESS (0) on success. Negative value on failure:

  • GSD_ERROR_IO: IO error (check errno).

  • GSD_ERROR_INVALID_ARGUMENT: handle is NULL.

int gsd_end_frame(gsd_handle *handle)

Commit the current frame and increment the frame counter.

Parameters:

  • handle – Handle to an open GSD file.

Returns:

  • GSD_SUCCESS (0) on success. Negative value on failure:

  • GSD_ERROR_IO: IO error (check errno).

  • GSD_ERROR_INVALID_ARGUMENT: handle is NULL.

  • GSD_ERROR_FILE_MUST_BE_WRITABLE: The file was opened read-only.

  • GSD_ERROR_MEMORY_ALLOCATION_FAILED: Unable to allocate memory.

int gsd_write_chunk(struct gsd_handle *handle, const char *name, gsd_type type, uint64_t N, uint32_t M, uint8_t flags, const void *data)

Write a data chunk to the current frame. The chunk name must be unique within each frame. The given data chunk is written to the end of the file and its location is updated in the in-memory index. The data pointer must be allocated and contain at least contains at least N * M * gsd_sizeof_type(type) bytes.

Parameters:

  • handle – Handle to an open GSD file.

  • name – Name of the data chunk.

  • type – type ID that identifies the type of data in data.

  • N – Number of rows in the data.

  • M – Number of columns in the data.

  • flags – Unused, set to 0.

  • data – Data buffer.

Note

If the GSD file is version 1.0, the chunk name is truncated to 63 bytes. GSD version 2.0 files support arbitrarily long names.

Returns:

  • GSD_SUCCESS (0) on success. Negative value on failure:

  • GSD_ERROR_IO: IO error (check errno).

  • GSD_ERROR_INVALID_ARGUMENT: handle is NULL, N == 0, M == 0, type is invalid, or flags != 0.

  • GSD_ERROR_FILE_MUST_BE_WRITABLE: The file was opened read*only.

  • GSD_ERROR_NAMELIST_FULL: The file cannot store any additional unique chunk names.

  • GSD_ERROR_MEMORY_ALLOCATION_FAILED: failed to allocate memory.

const struct gsd_index_entry_t *gsd_find_chunk(struct gsd_handle *handle, uint64_t frame, const char *name)

Find a chunk in the GSD file. The found entry contains size and type metadata and can be passed to gsd_read_chunk() to read the data.

Parameters:

  • handle – Handle to an open GSD file.

  • frame – Frame to look for chunk.

  • name – Name of the chunk to find.

Returns:

A pointer to the found chunk, or NULL if not found.

int gsd_read_chunk(gsd_handle *handle, void *data, const gsd_index_entry_t *chunk)

Read a chunk from the GSD file. The index entry must first be found by gsd_find_chunk(). data must point to an allocated buffer with at least N * M * gsd_sizeof_type(type) bytes.

Parameters:

  • handle – Handle to an open GSD file.

  • data – Data buffer to read into.

  • chunk – Chunk to read.

Returns:

0 on success

  • GSD_SUCCESS (0) on success. Negative value on failure:

  • GSD_ERROR_IO: IO error (check errno).

  • GSD_ERROR_INVALID_ARGUMENT: handle is NULL, data is NULL, or chunk is NULL.

  • GSD_ERROR_FILE_MUST_BE_READABLE: The file was opened in append mode.

  • GSD_ERROR_FILE_CORRUPT: The GSD file is corrupt.

uint64_t gsd_get_nframes(gsd_handle *handle)

Get the number of frames in the GSD file.

Parameters:

  • handle – Handle to an open GSD file.

Returns:

The number of frames in the file, or 0 on error.

size_t gsd_sizeof_type(gsd_type type)

Query size of a GSD type ID.

Parameters:

  • type – Type ID to query

Returns:

Size of the given type, or 0 for an unknown type ID.

uint32_t gsd_make_version(unsigned int major, unsigned int minor)

Specify a version number.

Parameters:

  • major – major version.

  • minor – minor version.

Returns:

a packed version number aaaa.bbbb suitable for storing in a gsd file version entry.

const char *gsd_find_matching_chunk_name(struct gsd_handle *handle, const char *match, const char *prev)

Search for chunk names in a gsd file.

Parameters:

  • handle – Handle to an open GSD file.

  • match – String to match.

  • prev – Search starting point.

To find the first matching chunk name, pass NULL for prev. Pass in the previous found string to find the next after that, and so on. Chunk names match if they begin with the string in match. Chunk names returned by this function may be present in at least one frame.

Returns:

Pointer to a string, NULL if no more matching chunks are found found, or NULL if prev is invalid.

int gsd_upgrade(gsd_handle *handle)

Upgrade a GSD file to the latest specification.

Parameters:

  • handle – Handle to an open GSD file.

Returns:

0 on success

  • GSD_SUCCESS (0) on success. Negative value on failure:

  • GSD_ERROR_IO: IO error (check errno).

  • GSD_ERROR_INVALID_ARGUMENT: handle is NULL, data is NULL, or chunk is NULL.

  • GSD_ERROR_FILE_MUST_BE_WRITEABLE: The file was opened in the read only mode.

Constants

Data types

gsd_type GSD_TYPE_UINT8

Type ID: 8-bit unsigned integer.

gsd_type GSD_TYPE_UINT16

Type ID: 16-bit unsigned integer.

gsd_type GSD_TYPE_UINT32

Type ID: 32-bit unsigned integer.

gsd_type GSD_TYPE_UINT64

Type ID: 64-bit unsigned integer.

gsd_type GSD_TYPE_INT8

Type ID: 8-bit signed integer.

gsd_type GSD_TYPE_INT16

Type ID: 16-bit signed integer.

gsd_type GSD_TYPE_INT32

Type ID: 32-bit signed integer.

gsd_type GSD_TYPE_INT64

Type ID: 64-bit signed integer.

gsd_type GSD_TYPE_FLOAT

Type ID: 32-bit single precision floating point.

gsd_type GSD_TYPE_DOUBLE

Type ID: 64-bit double precision floating point.

Open flags

gsd_open_flag GSD_OPEN_READWRITE

Open file in read/write mode.

gsd_open_flag GSD_OPEN_READONLY

Open file in read only mode.

gsd_open_flag GSD_OPEN_APPEND

Open file in append only mode.

Error values

gsd_error GSD_SUCCESS

Success.

gsd_error GSD_ERROR_IO

IO error. Check errno for details.

gsd_error GSD_ERROR_INVALID_ARGUMENT

Invalid argument passed to function.

gsd_error GSD_ERROR_NOT_A_GSD_FILE

The file is not a GSD file.

gsd_error GSD_ERROR_INVALID_GSD_FILE_VERSION

The GSD file version cannot be read.

gsd_error GSD_ERROR_FILE_CORRUPT

The GSD file is corrupt.

gsd_error GSD_ERROR_MEMORY_ALLOCATION_FAILED

GSD failed to allocated memory.

gsd_error GSD_ERROR_NAMELIST_FULL

The GSD file cannot store any additional unique data chunk names.

gsd_error GSD_ERROR_FILE_MUST_BE_WRITABLE

This API call requires that the GSD file opened in with the mode GSD_OPEN_APPEND or GSD_OPEN_READWRITE.

gsd_error GSD_ERROR_FILE_MUST_BE_READABLE

This API call requires that the GSD file opened the mode GSD_OPEN_READ or GSD_OPEN_READWRITE.

Data structures

type gsd_handle

Handle to an open GSD file. All members are read-only. Only public members are documented here.

gsd_header_t header

File header. Use this field to access the header of the GSD file.

int64_t file_size

Size of the open file in bytes.

gsd_open_flag open_flags

Flags used to open the file.

type gsd_header_t

GSD file header. Access version, application, and schema information.

uint32_t gsd_version

GSD file format version from gsd_make_version()

char application[64]

Name of the application that generated this file.

char schema[64]

Name of data schema.

uint32_t schema_version

Schema version from gsd_make_version().

type gsd_index_entry_t

Entry for a single data chunk in the GSD file.

uint64_t frame

Frame index of the chunk.

uint64_t N

Number of rows in the chunk data.

uint8_t M

Number of columns in the chunk.

uint8_t type

Data type of the chunk. See Data types.

type gsd_open_flag

Enum defining the file open flag. Valid values are GSD_OPEN_READWRITE, GSD_OPEN_READONLY, and GSD_OPEN_APPEND.

type gsd_type

Enum defining the file type of the GSD data chunk.

type gsd_error

Enum defining the possible error return values.

type uint8_t

8-bit unsigned integer (defined by C compiler).

type uint32_t

32-bit unsigned integer (defined by C compiler).

type uint64_t

64-bit unsigned integer (defined by C compiler).

type int64_t

64-bit signed integer (defined by C compiler).

type size_t

unsigned integer (defined by C compiler).