#!/bin/bash
set -e

pkg=mindthegap

if [ "${AUTOPKGTEST_TMP}" = "" ] ; then
  AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
  trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM
fi

cp -r /usr/share/doc/mindthegap/examples "${AUTOPKGTEST_TMP}"

cd "${AUTOPKGTEST_TMP}"/examples/data
gunzip r*.gz contigs.fasta.gz
cd "${AUTOPKGTEST_TMP}"/examples/test
gunzip -r *

echo "Invoking simple_test.sh:"
bash simple_test.sh
echo "Invoking simple_full_test.sh:"
bash simple_full_test.sh
