libpappsomspp
Library for mass spectrometry
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mgfoutput.h
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1/**
2 * \file pappsomspp/msrun/output/mgfoutput.h
3 * \date 6/5/2020
4 * \author Olivier Langella
5 * \brief write msrun peaks into MGF output stream
6 */
7
8/*******************************************************************************
9 * Copyright (c) 2020 Olivier Langella <Olivier.Langella@u-psud.fr>.
10 *
11 * This file is part of the PAPPSOms++ library.
12 *
13 * PAPPSOms++ is free software: you can redistribute it and/or modify
14 * it under the terms of the GNU General Public License as published by
15 * the Free Software Foundation, either version 3 of the License, or
16 * (at your option) any later version.
17 *
18 * PAPPSOms++ is distributed in the hope that it will be useful,
19 * but WITHOUT ANY WARRANTY; without even the implied warranty of
20 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
21 * GNU General Public License for more details.
22 *
23 * You should have received a copy of the GNU General Public License
24 * along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
25 *
26 ******************************************************************************/
27
28#pragma once
29
30#include <QIODevice>
31#include <QTextStream>
32#include "../../massspectrum/qualifiedmassspectrum.h"
33
34namespace pappso
35{
36/**
37 * @todo write docs
38 */
40{
41 public:
42 /**
43 * Default constructor
44 */
45 MgfOutput(QIODevice *p_output_device);
46 void write(const QualifiedMassSpectrum &mass_spectrum);
47 void close();
48
49 /**
50 * Destructor
51 */
52 virtual ~MgfOutput();
53
54 private:
55 QTextStream *mpa_outputStream;
56};
57} // namespace pappso
QTextStream * mpa_outputStream
Definition mgfoutput.h:55
Class representing a fully specified mass spectrum.
#define PMSPP_LIB_DECL
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition aa.cpp:39