libpappsomspp
Library for mass spectrometry
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mzformatenumstr.cpp
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1/**
2 * \file pappsomspp/msfile/mzformatenumstr.cpp
3 * \date 12/2/2021
4 * \author Olivier Langella <olivier.langella@universite-paris-saclay.fr>
5 * \brief convert mzformat enumerations to strings
6 *
7 */
8
9/*******************************************************************************
10 * Copyright (c) 2021 Olivier Langella
11 *<olivier.langella@universite-paris-saclay.fr>.
12 *
13 * This file is part of the PAPPSOms++ library.
14 *
15 * PAPPSOms++ is free software: you can redistribute it and/or modify
16 * it under the terms of the GNU General Public License as published by
17 * the Free Software Foundation, either version 3 of the License, or
18 * (at your option) any later version.
19 *
20 * PAPPSOms++ is distributed in the hope that it will be useful,
21 * but WITHOUT ANY WARRANTY; without even the implied warranty of
22 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
23 * GNU General Public License for more details.
24 *
25 * You should have received a copy of the GNU General Public License
26 * along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
27 *
28 ******************************************************************************/
29
30#include "mzformatenumstr.h"
31#include "../pappsoexception.h"
32#include <QObject>
33
34using namespace pappso;
35
36const QString
38{
39
40 QString mz_format_str;
41 switch(mz_format_enum)
42 {
44 mz_format_str = "abSciexT2D";
45 break;
47 mz_format_str = "abSciexWiff";
48 break;
50 mz_format_str = "agilentMassHunter";
51 break;
53 mz_format_str = "brukerBaf";
54 break;
56 mz_format_str = "brukerFid";
57 break;
59 mz_format_str = "brukerTims";
60 break;
62 mz_format_str = "brukerYep";
63 break;
64 case MzFormat::MGF:
65 mz_format_str = "MGF";
66 break;
67 case MzFormat::msn:
68 mz_format_str = "msn";
69 break;
70 case MzFormat::mz5:
71 mz_format_str = "mz5";
72 break;
73 case MzFormat::mzML:
74 mz_format_str = "mzML";
75 break;
76 case MzFormat::mzXML:
77 mz_format_str = "mzXML";
78 break;
80 mz_format_str = "SQLite3";
81 break;
83 mz_format_str = "thermoRaw";
84 break;
86 mz_format_str = "watersRaw";
87 break;
88 case MzFormat::xy:
89 mz_format_str = "xy";
90 break;
91 default:
92 throw pappso::PappsoException(QObject::tr("MzFormat unknown :\n%1")
93 .arg((std::uint8_t)mz_format_enum));
94 }
95 return mz_format_str;
96}
static const QString toString(MzFormat mz_format_enum)
convert mz format enumeration to human readable string
convert mzformat enumerations to strings
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition aa.cpp:39
MzFormat
Definition types.h:120
@ xy
(x,y) format
@ SQLite3
SQLite3 format.
@ MGF
Mascot format.